Browse of TCMCG048C09025 protein

CDS

Accession Number	TCMCG048C09025
gbkey	CDS
Protein Id	XP_031268761.1
Location	complement(join(1250275..1250885,1251344..1251715,1252483..1253584,1254149..1254444,1254973..1255051,1255185..1255272,1255884..1256260,1256825..1258198,1260069..1260305,1260926..1261169,1261289..1261348,1268345..1268674,1268794..1268872,1269518..1269600,1269725..1269802,1270086..1270166,1270252..1270339,1270533..1270619,1270839..1270987,1271106..1271179,1272420..1272443))
Gene	LOC116127259
GeneID	116127259
Organism	Pistacia vera

Protein

Length	1970aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA578116
db_source	XM_031412901.1
Definition	mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTTTTCAGAATTGGAGGTCTTCATCATGTATCATGGTTCCAGTTTCTCCCCAATGAATCTGATGTGAATACTCTTCCTGATAAAAGGTGCAACAGTGTGAAACTGGACCAGAAAGATGCTGCTACCTTCCTGGTACTTACTTCTCATCTTCAGTTGCAGAAGGAGGGATTTCTCAGCACATGGACAAATTCCTTTGTTGGACCTTGGGATCCATCTCAGGGTCTGCACAATCCTGATGAAAAGATTAAGCTCTGGCTATTTCTTCCTGGGCGCCACTCATCTGTTTCAGAAACCGCTCAAGCTGCTGTATCAAGATTAAGAGTTGTTGCATCTGGGCTTTGGGTTGCTCCTGGGGACTCAGAAGAGGTTGCAGCCGCCCTTTCTCAGGCTTTAAGGAACTGTATAGAAAGAGCACTTATTGGACTTTCCTACATGAGATTTGGAGATGTATTCTCAAAGTATCATCAATCTCAAAGTGAAGAATCTTTCAGGAGAGGCCATCCAACAGTTGAGTTCGTCTTTGCTGCCACTGAAGAGGCAATCTTTGTGCATGCTGTAGTATCTGCAAAGCATATACGTGCGCTTTCCGGTGGTGATGTGGAAAGAGTATTAGCACATTCATCTAACAGCAGTTCCAATTTCAAACTTCCAGTGATAGTTTCTCCTCATGGTATGCGTGGTAGGCTCACTGGATTTTGTCCGAACGATCTTGTCAAGCAAGTATATTTTAGTGCTGGCAAGTCTAGGACTACAAATGGATGTATAGGTCTACCATATAATGTTTCACAAGGTTCTGGTTGCCAGCTGAATGGGCAAAATTGCTACGTTGAAGTTACCCTTGGTTGCCCTAGATCTTGTAGTGATAAAACATCGCAAGCAAACTCAAATTCAGTAAGGAATTTACCCAAGCATAACTCTGCTGAATCTCCTCCAGTTGGAAGAAGTGATCAGAAGGGACCACCAGATCACTTATCGGTGTATGAAAAGACATTTATCTATCCAGTTGAAGCCGTGCTTGTCCCTGTCTTGCAAACATCATTCTCCAGATCTTCTTTGAGAAGATTTTGGCTGCAAAATTGGATAGGGCCATCAATGGCTGGTTCATCTTTCCTCATGCATTGTTTTGGTAATTTAGACTCAATGGAAGGATCTTGGGTTGAAACCAATGGAATGCATACTCGTGGTTATAATAGTAGTAGCAATAGCAATAATAGTAGCTTTAACTCCGTAAGTGGCAGCTCCAGTGATAGTGATTACAAGATGACCATAGGAACTGGTGATCTTGAGGCAGATGCGGATTCTTTAACGTGTAGGCAGTCTGGTTTATCTTCTAGTAATCAGCTACAAAATGATGGCCCTAAATTGGGTTCTAAGCGCCCTCGAATGGGGATGGCAGACTCATTTGGTCAACTGGGTACAGTTACAAATGCTTCTGATTTAGGTTCTGTAGAAAATAATTCAGGGATTACTGGAGTTACAAATGATCAGATCTGGGACTGGGATGATGATGACAGAGGCAATGGCATGGATATCCAAGCTCTTCTATCAGAGTTCGGAGATTTTGGTGACTTTTTTGAAAATGATGCCTTGCCTTTTGGGGAGCCCCCAGGAACTGCAGAGTCTCAGGCTCTTATTTTTTCTGCTCCAGACAGTGGAGATGTAGGTAGCAGTCCAGTTGTGCTAATGGATGTTTCAGATCAGATGCTAGTGCCTGTTAATTTTCCCTCTTTTGAGAGCTTTAATTCGCAGCCTCCAGTGGCCATAGAGGAGTGTGTCAGCAAAAGCCAAGAAGTCACGAACAGTGCTCTGACATCAGGTCCAGTGAACCATACTCCAGCTTCTTCCACGGGTGAGTTTGATCATCTAATGAAAGCTGAAGCACTGATGACCTTTGCACCAGAATATGGAGCAGTTGAAACTCCTACAAGTGAGTTGTCCTCAACGATCTTCAGAAGCCCATATCATCCTAAGTCTCATAAAGTAGAAAGTTCAAATTCAAGCACAAATAATTATGTATATGGTGCAACCCCACCCTCCTCTCCTTGCATTGATGGATCAGATGAGAAGAATGGCATGCCTGTGAAGTCGAAACCAAGTACTGGAAAGCATGATTCAAGTGGTTTCCTCCAGTCAAAGAAATATTACACTCATGTGGAGAGCTCTAGAGACCAACATGACAGGAAATCATTAACACATAAAGACAGCAATGCTCCAAGCGAGGGGGTGCTTTTATCCCCATTCTCTAATTTCAGTTCTACAAACGCTGTCACAGCTGTCTCAAGGAAAATGAATGAGGGCACATTAGGAGCGGAGCATTTTTTTATGCCTCTGAAGAATGTGCTTGCAACTGAAGTTGAATGCATTATGTTCCAAGCTTCCATGTGCAGGATACGCCATGTACTTCTATTCTCCAGTAACCCTTCACCTATGAGCTTGAGTAGGTTCGCTGGAAGCGTGGTGTTGAATCAGTTGCCTGGTGACTCAAGTACCATGACAGAAAGCATGTCTGGCAGGTATGAGGTCAAGAAGAAAGAAAACATTCCTGTTAGGATTGCTGGTGATATTGATGGAGGAATACTTGATGGGCACCTTAATGCACCTGTTGGTGTATGGCGTACTGTTGGAGTTACTAAAGCTTCAAAAGCTACTAATTCACCAAGCATTGAAGCTAGTCCATCTATGCCTCATAATTCATTCAGTGAGGAAGGTATGCTCTCCTATGGGCATAGGCAACCCCTTCAAGAACTTCTTGATGGCATGGCATTTCTTGTCCAACAAGCTACCTCCTTTGTTGATGTGGCCCTGGATGCGGATTGTGGTGATGGTCCTTATGGTTGGCTTGCATTGCAAGAGCAATGGAGGCATGAATTTTCTTGTGGACCTTCCATGGTCCATGCTGGTTGTGGAGGGACTTTGGCTTCTTGTCACTCCTTGGACATTGCTGGCGTGGAGCTAGTAGATCCACTTTCTGCTGATATTCATTCTTCTTCTGTAATTAGTTTGCTGCAGTCTGAAATTAAATCAGCCTTAAAATCTGCTTTTGGCGTTTTGGATGGTCCGTTGTCTGTCACTGATTGGTGCAAAGGCCGTGCTCAATCAGTTGATGCAGGAGCCTTAGCTGATGGATCTGCTGAATCTATTGTAAGTGAAGGCAGAGATTCTTCAAGTACTGTTACTTTATCTGTAGGAGAAGCAATGAGTCCATCCCAATCTTCTGGTGGCGGAACTAAGATGGATGAAACAAGCCAAAGGAGATTAAACCAAGATATTGCCAATTCAGAGTCAGAACAACAATTGTCTGCCCGTTTAAGGCCCACACTTTATGTCCTTCCTTCACCTGCTATACTCGTTGGGTACCAGGATGATTGGCTTAAGACGTCAGCAACCTCTTTACAGTTCTGGGAGAAGGCACCTCTTGAACCATATGCTTTACCAAAACCAGTCACTTATAGTGTTATATGTCCAGACATTGATCCCCTTACTTCTGCTGCGGCCGATTTTTTCCAACAACTAGGAACTGTTTATGAGACCTGCAAGCTGGGAACTCATTCACCACAGAATTTGGGAAATCAAATGGAGATAGATTCGGGGAAATCACCATCTTCGGGTTTTGTTCTACTGGATTGTCCTCAATCAATGAAAATAGAAAGCAGTAATGCGTCACTTGTGGGATCGATAAGCGATTATTTTCTCTCACTGTCCAATGGCTGGGACTTGACAAGCTTTTTAAAGTCTCTCTCGAAGGCTCTCAAAGCTTTGAAACTTGGTACAAGTTTGTCCACAAACCTAAAAGAAGGAAATAGTGGTCCTTGTACGGTAATCTACGTGGTGTGCCCCTTCCCGGAGCCTATGGCCGTTCTACAAACTGTTATTGAATCTTCTGTTTCTCTTGGATCAATTACAAATTCATCTGACAGAGACAGGAGATCTATTTTGCACAGTCAGGTTGGGAAGGCATTAAGCTGCTCAGCTGCTGTGGATGAAGCATCTGTATCCAATGTTCTAGTGATTTCTGGTTTCAGCATTCCCAAGTTGGTACTGCAAATTGTGACAGTTGATGCCATTTTTAGGGTTACAAGTCCAGGTTTTAATGAACTTCTTGTTCTCAAGGAGACTGCATTCACCATATACAACAAGGCTCGGCGAATTTTACGAGGATCCTCTAATGATATGGTTAATACATCATCATTTTCTGGTAGATCTCATTCGGTTTTAACTCAAATGACTTCTATTCCAGGGATGTGGAAGGATTGTGTTGGTTCTCGAATGACAGGACCTCCCCTTCCTAGAGAGGGTGAAATCGATGCTACCTTGAGGCCTAATACTTGGGATAATTCCTGGCAAACTAGAACTGGTGGATTAAGTTGTGATCCTAACAGAAACGGAGATTTTATTCTTCAAGATGAAATTCGTTTTTTGTTTGAACCACTTTTTATTCTTGCGGAACCTGGCTCCCTAGAGCATGGACTTCAATCTACAGTTTTTGGTAATCCAACTTCTGAATCATCAAAGCAATTGTCCGATGATGTTAGTGGAGGCTTCATGCCTAGTGGAAGTTCGGTGGGAAGTGTTGAAGCTGGATCAAGCTCTCAGCTTGATGGATCTGAGTCTGATGGCTTTGGGTCTGCCCATCAAAAGACTCTTCCAAGCCTACATTGCTGTTATGGGTGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACTGATGCTAGGGGAGAATTGCTTGACAGCCATATATTTCCATTTGGTGGAATCAGTAGTAGGCAGGACACAAAAGGTCTGCAATGCCTATTTGTGCAAGTTTTACAGCAAGGCTGCCAGATATTGCAGACATGTTCTCCTGATTCCGGTGCTGCAAAGCCAAGAGATTTCGTGATTGCACGCATTGGAAGTTTCTATGAGCTTGAATACCTAGAGTGGCAGAAAGCCATTTATTCAGTTGGTGGGTCTGAGATGAAGAAATGGCCTTTGCAACTACGTCGATCTGTGCCTGATGGGATGCCTTCAAGCAGTAATGGCACGTCCTTGCAGCAGCAGGAGATGAGTTTGATCCAAGAGAGGGCACTGCCATCCTCACCTAGTCCATTGTATAGCCCTCACTCAAAATCTTCTGGCTTTATGAAAGGTGGTTTAGGACAACCTGCCGCAAGAAAACAGCTTATTAGTGGACATACAATGGTTGACAACTCAAGGGGGTTGCTTCAGTGGGTACAGAGCATCAGCTTTGTTGCAATTTCAATCGACCATTCTTTACATTTAGTTCATCAAGCAGATTCACCATCTCCTGGAGGAAGTCAAGGTAGCAGTGCTGTGGGCCTGTCAGGCTATTTGGAAGGTTTCACCCCTGTAAAGTCCCTCGGTGCTTCATCTGCATCATACATATTGATCCCATCACCCAGCATGCGCTTCCTTCCTCCAACACCTCTCCAGCTCCCCACATGCCTTACTGCCGAGTCTCCCCCCCTCGCTCATCTCCTTCACAGTAAAGGCTCTGCAATTCCCGTTTCCACAGGTTTTGTGGTCTCCAAAGCTGTACCATCTATGAGAAAAGACCGCAAGAACAACTTGAAAGAAGAATGGCCTTCTGTACTTTCAGTTGGTCTAATTGATTATTATGGAGGTAATAACATTACCCAAGATAAAATCGTAAGGGGAATTATCAAGCAGGGAAGAAGGACTGTAAGCTCAGAAGCTAAAGATTTTGAAATAGAGACCCATTTGATTCTCGAGTCTATTGCAGCAGAACTTCATGCCCTGTCATGGATGACTGTGAGCCCTGCTTACTTGGAGCGTCGAACTGCACTGCCTTTTCACTGTGATATGGTTTTAAGATTGAGAAGGTTGCTTCATTTTGCTGATAAAGAGCTTACACAGCAGGCAGATAAGTCACAAGTGTAG

Protein:   MWTNVFRIGGLHHVSWFQFLPNESDVNTLPDKRCNSVKLDQKDAATFLVLTSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVSETAQAAVSRLRVVASGLWVAPGDSEEVAAALSQALRNCIERALIGLSYMRFGDVFSKYHQSQSEESFRRGHPTVEFVFAATEEAIFVHAVVSAKHIRALSGGDVERVLAHSSNSSSNFKLPVIVSPHGMRGRLTGFCPNDLVKQVYFSAGKSRTTNGCIGLPYNVSQGSGCQLNGQNCYVEVTLGCPRSCSDKTSQANSNSVRNLPKHNSAESPPVGRSDQKGPPDHLSVYEKTFIYPVEAVLVPVLQTSFSRSSLRRFWLQNWIGPSMAGSSFLMHCFGNLDSMEGSWVETNGMHTRGYNSSSNSNNSSFNSVSGSSSDSDYKMTIGTGDLEADADSLTCRQSGLSSSNQLQNDGPKLGSKRPRMGMADSFGQLGTVTNASDLGSVENNSGITGVTNDQIWDWDDDDRGNGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQALIFSAPDSGDVGSSPVVLMDVSDQMLVPVNFPSFESFNSQPPVAIEECVSKSQEVTNSALTSGPVNHTPASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSTIFRSPYHPKSHKVESSNSSTNNYVYGATPPSSPCIDGSDEKNGMPVKSKPSTGKHDSSGFLQSKKYYTHVESSRDQHDRKSLTHKDSNAPSEGVLLSPFSNFSSTNAVTAVSRKMNEGTLGAEHFFMPLKNVLATEVECIMFQASMCRIRHVLLFSSNPSPMSLSRFAGSVVLNQLPGDSSTMTESMSGRYEVKKKENIPVRIAGDIDGGILDGHLNAPVGVWRTVGVTKASKATNSPSIEASPSMPHNSFSEEGMLSYGHRQPLQELLDGMAFLVQQATSFVDVALDADCGDGPYGWLALQEQWRHEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHSSSVISLLQSEIKSALKSAFGVLDGPLSVTDWCKGRAQSVDAGALADGSAESIVSEGRDSSSTVTLSVGEAMSPSQSSGGGTKMDETSQRRLNQDIANSESEQQLSARLRPTLYVLPSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPVTYSVICPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLTSFLKSLSKALKALKLGTSLSTNLKEGNSGPCTVIYVVCPFPEPMAVLQTVIESSVSLGSITNSSDRDRRSILHSQVGKALSCSAAVDEASVSNVLVISGFSIPKLVLQIVTVDAIFRVTSPGFNELLVLKETAFTIYNKARRILRGSSNDMVNTSSFSGRSHSVLTQMTSIPGMWKDCVGSRMTGPPLPREGEIDATLRPNTWDNSWQTRTGGLSCDPNRNGDFILQDEIRFLFEPLFILAEPGSLEHGLQSTVFGNPTSESSKQLSDDVSGGFMPSGSSVGSVEAGSSSQLDGSESDGFGSAHQKTLPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQTCSPDSGAAKPRDFVIARIGSFYELEYLEWQKAIYSVGGSEMKKWPLQLRRSVPDGMPSSSNGTSLQQQEMSLIQERALPSSPSPLYSPHSKSSGFMKGGLGQPAARKQLISGHTMVDNSRGLLQWVQSISFVAISIDHSLHLVHQADSPSPGGSQGSSAVGLSGYLEGFTPVKSLGASSASYILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPVSTGFVVSKAVPSMRKDRKNNLKEEWPSVLSVGLIDYYGGNNITQDKIVRGIIKQGRRTVSSEAKDFEIETHLILESIAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELTQQADKSQV